Index

_

__init__() (bayescart.bcart.BCART method) (bayescart.bcart.BCARTFast method) (bayescart.node.Node method) (bayescart.node_data.NodeData method) (bayescart.node_data.NodeDataClassification method) (bayescart.node_data.NodeDataRegression method) (bayescart.parallel_tempering_base.BCARTPT method) (bayescart.tempering_geom_lik.BCARTGeomLik method) (bayescart.tempering_geometric.BCARTGeom method) (bayescart.tempering_pseudo_prior.BCARTPseudoPrior method) (bayescart.tree.Tree method)

_data (bayescart.node.Node attribute) _depth (bayescart.node.Node attribute) _rng (bayescart.node.Node attribute)

A

AbstractMethodError add_node() (bayescart.tree.Tree method)

apply_split() (bayescart.tree.Tree method) avail_splits (bayescart.node_data.NodeData attribute)

B

bayescart module bayescart.bcart module bayescart.eval module bayescart.exceptions module bayescart.mytyping module bayescart.node module bayescart.node_data module bayescart.parallel_tempering_base module bayescart.tempering_geom_lik module

bayescart.tempering_geometric module bayescart.tempering_pseudo_prior module bayescart.tree module bayescart.utils module BCART (class in bayescart.bcart) BCARTClassic (class in bayescart.bcart) BCARTClassicSlow (class in bayescart.bcart) BCARTFast (class in bayescart.bcart) BCARTGeom (class in bayescart.tempering_geometric) BCARTGeomLik (class in bayescart.tempering_geom_lik) BCARTPseudoPrior (class in bayescart.tempering_pseudo_prior) BCARTPT (class in bayescart.parallel_tempering_base)

C

calc_avail_split_and_vars() (bayescart.node.Node method) (bayescart.node_data.NodeData method) calc_change_swap_mh_data() (bayescart.bcart.BCART method) (bayescart.bcart.BCARTClassicSlow method) (bayescart.tempering_geometric.BCARTGeom method) calc_grow_prune_mh_data() (bayescart.bcart.BCART method) (bayescart.bcart.BCARTClassicSlow method) (bayescart.tempering_geometric.BCARTGeom method) calc_llik() (bayescart.bcart.BCART method) calc_log_p_split() (bayescart.tempering_pseudo_prior.BCARTPseudoPrior method) calc_log_tree_prob() (bayescart.bcart.BCART method) (in module bayescart.eval) calc_log_tree_prob_and_llik() (in module bayescart.eval) calc_tree_llik() (in module bayescart.eval) calc_tree_post_prob() (in module bayescart.eval)

change_copy() (bayescart.bcart.BCART method) check_split_struct() (bayescart.tree.Tree method) compare_trees() (in module bayescart.eval) copy() (bayescart.bcart.BCART method) (bayescart.node.Node method) (bayescart.node.NodeFast method) (bayescart.node_data.NodeData method) (bayescart.node_data.NodeDataClassificationFast method) (bayescart.node_data.NodeDataFast method) (bayescart.node_data.NodeDataRegressionFast method) (bayescart.tree.Tree method) (bayescart.tree.TreeFast method) count_values() (bayescart.node.Node method) (bayescart.node_data.NodeData method) (bayescart.node_data.NodeDataClassification method)

D

debug (bayescart.node.Node attribute) (bayescart.node_data.NodeData attribute) (bayescart.tree.Tree attribute)

deep_copy() (bayescart.bcart.BCART method) depth (bayescart.node.Node property) dirichlet_logpdf() (in module bayescart.utils)

G

get_acceptance_prob() (bayescart.bcart.BCART method) (bayescart.parallel_tempering_base.BCARTPT method) (bayescart.tempering_pseudo_prior.BCARTPseudoPrior method) get_available_splits() (bayescart.node.Node method) (bayescart.node_data.NodeData method) get_children() (bayescart.tree.Tree method) get_data_averages() (bayescart.node.Node method) (bayescart.node_data.NodeData method) (bayescart.node_data.NodeDataRegression method) (bayescart.node_data.NodeDataRegressionFast method) get_data_split() (bayescart.node.Node method) (bayescart.node_data.NodeData method) get_leaves() (bayescart.tree.Tree method) get_leaves_counts() (bayescart.bcart.BCART method) get_leaves_means() (bayescart.bcart.BCART method) get_log_posterior_prob() (bayescart.bcart.BCART method) (bayescart.bcart.BCARTFast method) get_mu() (bayescart.node_data.NodeDataRegression method) get_n_leaves() (bayescart.tree.Tree method) get_new_split() (bayescart.node.Node method) get_nobs() (bayescart.node.Node method) (bayescart.node_data.NodeData method) get_nobs_from_arg() (bayescart.node_data.NodeData static method) get_node() (bayescart.tree.Tree method) get_nonleaf_nodes() (bayescart.tree.Tree method) get_p_split() (bayescart.bcart.BCART method) get_params() (bayescart.node.Node method) (bayescart.node_data.NodeData method) (bayescart.node_data.NodeDataClassification method) (bayescart.node_data.NodeDataRegression method)

get_parent() (bayescart.tree.Tree method) get_parents_with_two_leaves() (bayescart.tree.Tree method) get_posterior_params_mu() (bayescart.bcart.BCART method) get_posterior_params_p() (bayescart.bcart.BCART method) get_posterior_params_sigma() (bayescart.bcart.BCART method) get_preds() (bayescart.node.Node method) (bayescart.node_data.NodeData method) (bayescart.node_data.NodeDataRegression method) get_root() (bayescart.tree.Tree method) get_sibling() (bayescart.tree.Tree method) get_sigma() (bayescart.node_data.NodeDataRegression method) get_split_data() (bayescart.node.Node method) (bayescart.node_data.NodeData method) (bayescart.node_data.NodeDataClassification method) (bayescart.node_data.NodeDataRegression method) get_split_info() (bayescart.node.Node method) get_split_set() (bayescart.node_data.NodeData method) get_split_var() (bayescart.node_data.NodeData method) get_swap_acceptance_prob() (bayescart.parallel_tempering_base.BCARTPT method) (bayescart.tempering_geom_lik.BCARTGeomLik method) (bayescart.tempering_geometric.BCARTGeom method) (bayescart.tempering_pseudo_prior.BCARTPseudoPrior method) get_true_preds() (bayescart.node.Node method) grow_copy() (bayescart.bcart.BCART method)

H

has_data() (bayescart.node.Node method) (bayescart.node_data.NodeData method)

I

id (bayescart.node.Node property) id_counter (bayescart.tree.Tree attribute) InvalidTreeError invgamma_logpdf() (in module bayescart.utils) invgamma_rvs() (in module bayescart.utils) is_cat_split (bayescart.node_data.NodeData attribute)

is_classification (bayescart.bcart.BCART attribute) is_equal() (bayescart.tree.Tree method) is_l (bayescart.node.Node attribute) is_split_rule_empty() (bayescart.node.Node method) is_split_rule_emtpy() (bayescart.node_data.NodeData method) is_stump() (bayescart.tree.Tree method) is_valid() (bayescart.tree.Tree method)

K

K (bayescart.bcart.BCART attribute)

L

llik (bayescart.tree.Tree attribute)

log_tree_prior_prob (bayescart.tree.Tree attribute)

M

module bayescart bayescart.bcart bayescart.eval bayescart.exceptions bayescart.mytyping bayescart.node bayescart.node_data bayescart.parallel_tempering_base bayescart.tempering_geom_lik bayescart.tempering_geometric bayescart.tempering_pseudo_prior bayescart.tree bayescart.utils

mu (bayescart.node_data.NodeDataRegression attribute) my_choice() (in module bayescart.utils)

N

Node (class in bayescart.node) node_class (bayescart.tree.Tree attribute) (bayescart.tree.TreeFast attribute) node_min_size (bayescart.node_data.NodeData attribute) (bayescart.tree.Tree attribute) NodeData (class in bayescart.node_data) NodeDataClassification (class in bayescart.node_data)

NodeDataClassificationFast (class in bayescart.node_data) NodeDataFast (class in bayescart.node_data) NodeDataRegression (class in bayescart.node_data) NodeDataRegressionFast (class in bayescart.node_data) NodeFast (class in bayescart.node) norm_logpdf() (in module bayescart.utils) NotImplementedError

P

p (bayescart.node_data.NodeDataClassification attribute) plot_chain_comm() (in module bayescart.utils) plot_hists() (in module bayescart.utils)

plot_swap_prob() (in module bayescart.utils) produce_tree_table() (in module bayescart.eval) prune_copy() (bayescart.bcart.BCART method)

R

remove_node() (bayescart.tree.Tree method) resample_leaf_params() (bayescart.bcart.BCART method) resample_mu_sigma() (bayescart.bcart.BCART method) (bayescart.bcart.BCARTFast method) resample_mu_sigma_old() (bayescart.bcart.BCART method) resample_p() (bayescart.bcart.BCART method) reset_avail_splits() (bayescart.node_data.NodeData method)

reset_split_info() (bayescart.node.Node method) (bayescart.node_data.NodeData method) rng (bayescart.node_data.NodeData attribute) (bayescart.tree.Tree attribute) run() (bayescart.bcart.BCART method) (bayescart.parallel_tempering_base.BCARTPT method) (bayescart.tempering_pseudo_prior.BCARTPseudoPrior method)

S

sample_leaf() (bayescart.tree.Tree method) sample_leaf_params() (bayescart.bcart.BCART method) sample_prior_mu() (bayescart.bcart.BCART method) sample_prior_p() (bayescart.bcart.BCART method) sample_prior_sigma() (bayescart.bcart.BCART method) (bayescart.bcart.BCARTFast method) sample_split() (bayescart.node_data.NodeData method)

show() (bayescart.tree.Tree method) sigma (bayescart.node_data.NodeDataRegression attribute) sim_cgm98() (in module bayescart.utils) split_set (bayescart.node_data.NodeData attribute) split_var (bayescart.node_data.NodeData attribute) summarize_trees() (in module bayescart.eval) swap_copy() (bayescart.bcart.BCART method)

T

temperature (bayescart.tree.Tree attribute) tempering (bayescart.parallel_tempering_base.BCARTPT attribute) trans_prob_log() (bayescart.bcart.BCART method) (bayescart.bcart.BCARTClassicSlow method) (bayescart.tempering_geometric.BCARTGeom method)

trans_prob_log_pseudoprior() (bayescart.tempering_pseudo_prior.BCARTPseudoPrior method) Tree (class in bayescart.tree) TreeFast (class in bayescart.tree)

U

update_node_params() (bayescart.node.Node method) (bayescart.node_data.NodeData method) (bayescart.node_data.NodeDataClassification method) (bayescart.node_data.NodeDataRegression method) update_split() (bayescart.tree.Tree method) update_split_data() (bayescart.node.Node method) (bayescart.node_data.NodeData method)

update_split_info() (bayescart.node.Node method) (bayescart.node_data.NodeData method) update_subtree_data() (bayescart.tree.Tree method) (bayescart.tree.TreeFast method) update_tree() (bayescart.bcart.BCART method) (bayescart.bcart.BCARTFast method)

X

X (bayescart.node_data.NodeData attribute) (bayescart.node_data.NodeData property)

Y

y (bayescart.node_data.NodeData attribute) (bayescart.node_data.NodeData property)