bayescart

• bayescart package
  • Submodules
  • bayescart.bcart module
    • BCART
      • BCART.is_classification
      • BCART.K
      • BCART.__init__()
      • BCART.calc_change_swap_mh_data()
      • BCART.calc_grow_prune_mh_data()
      • BCART.calc_llik()
      • BCART.calc_log_tree_prob()
      • BCART.change_copy()
      • BCART.copy()
      • BCART.deep_copy()
      • BCART.get_acceptance_prob()
      • BCART.get_leaves_counts()
      • BCART.get_leaves_means()
      • BCART.get_log_posterior_prob()
      • BCART.get_p_split()
      • BCART.get_posterior_params_mu()
      • BCART.get_posterior_params_p()
      • BCART.get_posterior_params_sigma()
      • BCART.grow_copy()
      • BCART.prune_copy()
      • BCART.resample_leaf_params()
      • BCART.resample_mu_sigma()
      • BCART.resample_mu_sigma_old()
      • BCART.resample_p()
      • BCART.run()
      • BCART.sample_leaf_params()
      • BCART.sample_prior_mu()
      • BCART.sample_prior_p()
      • BCART.sample_prior_sigma()
      • BCART.swap_copy()
      • BCART.trans_prob_log()
      • BCART.update_tree()
    • BCARTClassic
    • BCARTClassicSlow
      • BCARTClassicSlow.calc_change_swap_mh_data()
      • BCARTClassicSlow.calc_grow_prune_mh_data()
      • BCARTClassicSlow.trans_prob_log()
    • BCARTFast
      • BCARTFast.__init__()
      • BCARTFast.get_log_posterior_prob()
      • BCARTFast.resample_mu_sigma()
      • BCARTFast.sample_prior_sigma()
      • BCARTFast.update_tree()
  • bayescart.eval module
    • calc_log_tree_prob()
    • calc_log_tree_prob_and_llik()
    • calc_tree_llik()
    • calc_tree_post_prob()
    • compare_trees()
    • produce_tree_table()
    • summarize_trees()
  • bayescart.exceptions module
    • AbstractMethodError
    • InvalidTreeError
    • NotImplementedError
  • bayescart.mytyping module
  • bayescart.node module
    • Node
      • Node.is_l
      • Node._data
      • Node._rng
      • Node.debug
      • Node._depth
      • Node.__init__()
      • Node.calc_avail_split_and_vars()
      • Node.copy()
      • Node.count_values()
      • Node.depth
      • Node.get_available_splits()
      • Node.get_data_averages()
      • Node.get_data_split()
      • Node.get_new_split()
      • Node.get_nobs()
      • Node.get_params()
      • Node.get_preds()
      • Node.get_split_data()
      • Node.get_split_info()
      • Node.get_true_preds()
      • Node.has_data()
      • Node.id
      • Node.is_split_rule_empty()
      • Node.reset_split_info()
      • Node.update_node_params()
      • Node.update_split_data()
      • Node.update_split_info()
    • NodeFast
      • NodeFast.copy()
  • bayescart.node_data module
    • NodeData
      • NodeData.X
      • NodeData.y
      • NodeData.rng
      • NodeData.debug
      • NodeData.node_min_size
      • NodeData.split_var
      • NodeData.split_set
      • NodeData.is_cat_split
      • NodeData.avail_splits
      • NodeData.X
      • NodeData.__init__()
      • NodeData.calc_avail_split_and_vars()
      • NodeData.copy()
      • NodeData.count_values()
      • NodeData.get_available_splits()
      • NodeData.get_data_averages()
      • NodeData.get_data_split()
      • NodeData.get_nobs()
      • NodeData.get_nobs_from_arg()
      • NodeData.get_params()
      • NodeData.get_preds()
      • NodeData.get_split_data()
      • NodeData.get_split_set()
      • NodeData.get_split_var()
      • NodeData.has_data()
      • NodeData.is_split_rule_emtpy()
      • NodeData.reset_avail_splits()
      • NodeData.reset_split_info()
      • NodeData.sample_split()
      • NodeData.update_node_params()
      • NodeData.update_split_data()
      • NodeData.update_split_info()
      • NodeData.y
    • NodeDataClassification
      • NodeDataClassification.p
      • NodeDataClassification.__init__()
      • NodeDataClassification.count_values()
      • NodeDataClassification.get_params()
      • NodeDataClassification.get_split_data()
      • NodeDataClassification.update_node_params()
    • NodeDataClassificationFast
      • NodeDataClassificationFast.copy()
    • NodeDataFast
      • NodeDataFast.copy()
    • NodeDataRegression
      • NodeDataRegression.mu
      • NodeDataRegression.sigma
      • NodeDataRegression.__init__()
      • NodeDataRegression.get_data_averages()
      • NodeDataRegression.get_mu()
      • NodeDataRegression.get_params()
      • NodeDataRegression.get_preds()
      • NodeDataRegression.get_sigma()
      • NodeDataRegression.get_split_data()
      • NodeDataRegression.update_node_params()
    • NodeDataRegressionFast
      • NodeDataRegressionFast.copy()
      • NodeDataRegressionFast.get_data_averages()
  • bayescart.parallel_tempering_base module
    • BCARTPT
      • BCARTPT.__init__()
      • BCARTPT.get_acceptance_prob()
      • BCARTPT.get_swap_acceptance_prob()
      • BCARTPT.run()
      • BCARTPT.tempering
  • bayescart.tempering_geom_lik module
    • BCARTGeomLik
      • BCARTGeomLik.__init__()
      • BCARTGeomLik.get_swap_acceptance_prob()
  • bayescart.tempering_geometric module
    • BCARTGeom
      • BCARTGeom.__init__()
      • BCARTGeom.calc_change_swap_mh_data()
      • BCARTGeom.calc_grow_prune_mh_data()
      • BCARTGeom.get_swap_acceptance_prob()
      • BCARTGeom.trans_prob_log()
  • bayescart.tempering_pseudo_prior module
    • BCARTPseudoPrior
      • BCARTPseudoPrior.__init__()
      • BCARTPseudoPrior.calc_log_p_split()
      • BCARTPseudoPrior.get_acceptance_prob()
      • BCARTPseudoPrior.get_swap_acceptance_prob()
      • BCARTPseudoPrior.run()
      • BCARTPseudoPrior.trans_prob_log_pseudoprior()
  • bayescart.tree module
    • Tree
      • Tree.id_counter
      • Tree.rng
      • Tree.node_min_size
      • Tree.debug
      • Tree.llik
      • Tree.log_tree_prior_prob
      • Tree.temperature
      • Tree.__init__()
      • Tree.add_node()
      • Tree.apply_split()
      • Tree.check_split_struct()
      • Tree.copy()
      • Tree.get_children()
      • Tree.get_leaves()
      • Tree.get_n_leaves()
      • Tree.get_node()
      • Tree.get_nonleaf_nodes()
      • Tree.get_parent()
      • Tree.get_parents_with_two_leaves()
      • Tree.get_root()
      • Tree.get_sibling()
      • Tree.is_equal()
      • Tree.is_stump()
      • Tree.is_valid()
      • Tree.node_class
      • Tree.remove_node()
      • Tree.sample_leaf()
      • Tree.show()
      • Tree.update_split()
      • Tree.update_subtree_data()
    • TreeFast
      • TreeFast.copy()
      • TreeFast.node_class
      • TreeFast.update_subtree_data()
  • bayescart.utils module
    • dirichlet_logpdf()
    • invgamma_logpdf()
    • invgamma_rvs()
    • my_choice()
    • norm_logpdf()
    • plot_chain_comm()
    • plot_hists()
    • plot_swap_prob()
    • sim_cgm98()
  • Module contents